Title: |  My analysis |
Species: |  Arabidopsis_thaliana |
Number of input regions: |  4781 |
Analysis time: |  2020-5-21 17:13 |
MethMotif version: |  version 1 |
ID | Species | TF | Family | Number of input regions with TFBS | C type | Cytosine beta scores in the TFBS | MethMotif logo | Details |
---|---|---|---|---|---|---|---|---|
1 | Arabidopsis_thaliana | REF6 MM3_AT_Seedling_REF6 |
C2H2 | 4781 | CG | ![]() |
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Regions with REF6 TFBS: OPEN,
DOWNLOAD CG methScore in motif: OPEN, DOWNLOAD CG beta score matrix: OPEN, DOWNLOAD |
CHG | ![]() |
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CHG methScore in motif: OPEN, DOWNLOAD | |||||
CHH | ![]() |
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CHH methScore in motif: OPEN, DOWNLOAD | |||||
2 | Arabidopsis_thaliana | REF6 MM1_AT_Seedling_REF6 |
C2H2 | 3781 | CG | ![]() |
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Regions with REF6 TFBS: OPEN,
DOWNLOAD CG methScore in motif: OPEN, DOWNLOAD CG beta score matrix: OPEN, DOWNLOAD |
CHG | ![]() |
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CHG methScore in motif: OPEN, DOWNLOAD | |||||
CHH | ![]() |
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CHH methScore in motif: OPEN, DOWNLOAD | |||||
3 | Arabidopsis_thaliana | REF6 MM1_AT_Inflorescence_REF6 |
C2H2 | 3746 | CG | ![]() |
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Regions with REF6 TFBS: OPEN,
DOWNLOAD CG methScore in motif: OPEN, DOWNLOAD CG beta score matrix: OPEN, DOWNLOAD |
CHG | ![]() |
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CHG methScore in motif: OPEN, DOWNLOAD | |||||
CHH | ![]() |
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CHH methScore in motif: OPEN, DOWNLOAD | |||||
4 | Arabidopsis_thaliana | REF6 MM2_AT_Seedling_REF6 |
C2H2 | 3476 | CG | ![]() |
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Regions with REF6 TFBS: OPEN,
DOWNLOAD CG methScore in motif: OPEN, DOWNLOAD CG beta score matrix: OPEN, DOWNLOAD |
CHG | ![]() |
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CHG methScore in motif: OPEN, DOWNLOAD | |||||
CHH | ![]() |
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CHH methScore in motif: OPEN, DOWNLOAD | |||||
5 | Arabidopsis_thaliana | TRB1 MM1_AT_Seedling_TRB1 |
Unspecified | 15 | CG | No CGs | ![]() |
Regions with TRB1 TFBS: OPEN,
DOWNLOAD CG methScore in motif: OPEN, DOWNLOAD CG beta score matrix: OPEN, DOWNLOAD |
CHG | ![]() |
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CHG methScore in motif: OPEN, DOWNLOAD | |||||
CHH | ![]() |
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CHH methScore in motif: OPEN, DOWNLOAD | |||||
6 | Arabidopsis_thaliana | NAC050 MM1_AT_Seedling_NAC050 |
NAC domain | 9 | CG | ![]() |
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Regions with NAC050 TFBS: OPEN,
DOWNLOAD CG methScore in motif: OPEN, DOWNLOAD CG beta score matrix: OPEN, DOWNLOAD |
CHG | ![]() |
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CHG methScore in motif: OPEN, DOWNLOAD | |||||
CHH | ![]() |
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CHH methScore in motif: OPEN, DOWNLOAD | |||||
7 | Arabidopsis_thaliana | NAC052 MM1_AT_Seedling_NAC052 |
NAC domain | 9 | CG | ![]() |
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Regions with NAC052 TFBS: OPEN,
DOWNLOAD CG methScore in motif: OPEN, DOWNLOAD CG beta score matrix: OPEN, DOWNLOAD |
CHG | ![]() |
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CHG methScore in motif: OPEN, DOWNLOAD | |||||
CHH | ![]() |
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CHH methScore in motif: OPEN, DOWNLOAD | |||||
8 | Arabidopsis_thaliana | LFY MM1_AT_Seedling_LFY |
Orphan | 2 | CG | ![]() |
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Regions with LFY TFBS: OPEN,
DOWNLOAD CG methScore in motif: OPEN, DOWNLOAD CG beta score matrix: OPEN, DOWNLOAD |
CHG | ![]() |
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CHG methScore in motif: OPEN, DOWNLOAD | |||||
CHH | ![]() |
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CHH methScore in motif: OPEN, DOWNLOAD | |||||
9 | Arabidopsis_thaliana | RPS4 MM1_AT_Leaf_RPS4 |
Disease resistance protein (TIR-NBS-LRR class) family | 1 | CG | ![]() |
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Regions with RPS4 TFBS: OPEN,
DOWNLOAD CG methScore in motif: OPEN, DOWNLOAD CG beta score matrix: OPEN, DOWNLOAD |
CHG | ![]() |
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CHG methScore in motif: OPEN, DOWNLOAD | |||||
CHH | No CHHs | ![]() |
CHH methScore in motif: OPEN, DOWNLOAD | |||||
10 | Arabidopsis_thaliana | MYB3R3 MM1_AT_Seedling_MYB3R3 |
MYB | 1 | CG | ![]() |
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Regions with MYB3R3 TFBS: OPEN,
DOWNLOAD CG methScore in motif: OPEN, DOWNLOAD CG beta score matrix: OPEN, DOWNLOAD |
CHG | No CHGs | ![]() |
CHG methScore in motif: OPEN, DOWNLOAD | |||||
CHH | ![]() |
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CHH methScore in motif: OPEN, DOWNLOAD | |||||
11 | Arabidopsis_thaliana | PIF5 MM1_AT_Seedling_PIF5 |
bHLH | 1 | CG | No CGs | ![]() |
Regions with PIF5 TFBS: OPEN,
DOWNLOAD CG methScore in motif: OPEN, DOWNLOAD CG beta score matrix: OPEN, DOWNLOAD |
CHG | No CHGs | ![]() |
CHG methScore in motif: OPEN, DOWNLOAD | |||||
CHH | ![]() |
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CHH methScore in motif: OPEN, DOWNLOAD | |||||
12 | Arabidopsis_thaliana | REV MM1_AT_Seedling_REV |
Homeobox-leucine zipper family | 1 | CG | No CGs | ![]() |
Regions with REV TFBS: OPEN,
DOWNLOAD CG methScore in motif: OPEN, DOWNLOAD CG beta score matrix: OPEN, DOWNLOAD |
CHG | ![]() |
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CHG methScore in motif: OPEN, DOWNLOAD | |||||
CHH | ![]() |
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CHH methScore in motif: OPEN, DOWNLOAD | |||||
13 | Arabidopsis_thaliana | SPCH MM1_AT_Seedling_SPCH |
bHLH | 1 | CG | ![]() |
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Regions with SPCH TFBS: OPEN,
DOWNLOAD CG methScore in motif: OPEN, DOWNLOAD CG beta score matrix: OPEN, DOWNLOAD |
CHG | No CHGs | ![]() |
CHG methScore in motif: OPEN, DOWNLOAD | |||||
CHH | ![]() |
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CHH methScore in motif: OPEN, DOWNLOAD |